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#1 Re: Multiwfn and wavefunction analysis » Atom colors and Cue Mode effect in VMD » 2024-09-29 09:50:37

There are only 33 named colors in VMD. Is this possible to set unique color for all elements in periodic table, ideally same color for each element as in Gaussview?

#3 Re: Multiwfn and wavefunction analysis » Plotting ORCA ESD predicted spectrum » 2023-09-19 14:16:11

Is the same also applicable for ORCA TD-DFT/TDA output for plotting fluorescence spectrum using Multiwfn? http://sobereva.com/wfnbbs/viewtopic.php?id=413

#4 Multiwfn and wavefunction analysis » Plotting ORCA ESD predicted spectrum » 2023-09-19 00:19:29

Abdullah
Replies: 4

Dear Prof. Tian,
Can Multiwfn be used to plot fluorescence and phosphorescence spectra from ORCA_ESD calculations output?

#6 Re: Multiwfn and wavefunction analysis » Discrepancy in UV-Vis Epsilon Values Between Multiwfn and Gaussview » 2023-09-07 17:21:40

Thanks professor, Are the epsilon values calculated as ϵ=f×Conversion Factor in Multiwfn? where conversion factor is 28700.

#7 Multiwfn and wavefunction analysis » Discrepancy in UV-Vis Epsilon Values Between Multiwfn and Gaussview » 2023-09-06 21:34:32

Abdullah
Replies: 4

Dear Prof. Tian Lu,

I hope this message finds you well.

I have generated UV-Vis spectrum using both Multiwfn and GaussView. However, I have observed a discrepancy in the epsilon values obtained from the two different computational tools.

Would you be so kind as to elucidate the formula that Multiwfn employs for calculating epsilon values from oscillator strengths?

#8 Quantum Chemistry » frequency scaling factor sclZPE for Shermo » 2022-03-19 08:09:29

Abdullah
Replies: 2

Hi, following this guide http://sobereva.com/391 , we get two correction factors i.e., frequency correction factor and ZPE correction factor. Which one of these should be put in sclZPE for Shermo?

#10 Re: Quantum Chemistry » Interaction energy and binding energy » 2022-03-05 21:09:29

The other option is of "Interaction energy and complex energy with counterpoise correction". Here what is meant by complex energy and how it is calculated

#11 Re: Quantum Chemistry » Interaction energy and binding energy » 2022-03-05 20:59:09

In Multiwfn to create ORCA input file for counterpoise corrected energies there are two options, one is Interaction energy with counterpoise correction which generate an input file containing three jobs. in this case CP corrected energies is difference of energy of first job and the energies of 2nd+3rd job?

#13 Quantum Chemistry » Interaction energy and binding energy » 2022-03-05 19:30:17

Abdullah
Replies: 6

Hi sir, we can calculate interaction energy by energy of optimized complex AB - energy of isolated (A+B (in the complex geometry). Is binding energy calculated by difference of optimized complex energy and its parts also isolately optimized  like energy of optimized complex AB - energy of optimized A - energy of optimized B? and is complex energy and interaction energy same?

#15 Quantum Chemistry » BSSE corrected binding Gibbs free energies » 2022-03-05 15:53:20

Abdullah
Replies: 17

BSSE corrected binding electronic energies are calculated by adding BSSE correction to the binding energy. Do the BSSE corrected binding Gibbs free energies are calculated in similar manner by adding the BSSE correction value we get from counterpoise single point energy calculation to the binding Gibbs free energy i.e., delta_G_BSSE-corrected = delta_G + E_BSSE-correction

#17 Quantum Chemistry » How to calculate HOMO LUMO gap at MP2 level using ORCA » 2021-12-08 09:58:42

Abdullah
Replies: 2

Hi, from MP2 calculation output file I only get HOMO LUMO orbital energies at SCF density. Is this possible to get orbital energies and HOMO LUMO gap at MP2 level in ORCA?

#19 Quantum Chemistry » atom size in VMD » 2021-09-30 15:41:56

Abdullah
Replies: 2

Hi, how to increase specific metal atom size in a complex in VMD graphics as certain heavier metal atoms appear smaller than carbon in figures obtained from VMD.

#20 Multiwfn and wavefunction analysis » exporting log file to gjf » 2021-02-16 06:54:39

Abdullah
Replies: 1

Hi, I'm converting gaussian output log files to gjf files by Multiwfn 100>2>10>exported gjf name>0 but I get empty gjf file without exported coordinates from log file.

#21 Re: Quantum Chemistry » Gibbs free energy of single atom in ORCA » 2021-02-10 06:42:50

sobereva wrote:

I have uploaded Shermo 2.0.8, now the PGlabel can be specified via argument.

Thanks Sir

#22 Re: Quantum Chemistry » Gibbs free energy of single atom in ORCA » 2021-02-08 23:05:30

Sir can you please add support for PGlabel parameter in command line. By running Shermo.exe orca.out  -PGlabel D5h I get this error
Error: Unable to recognize argument -PGlabel

#24 Re: Quantum Chemistry » Gibbs free energy of single atom in ORCA » 2021-02-07 15:35:00

sobereva wrote:
Abdullah wrote:

Sir WB97XD/def2tzvp ZPE scale factor be used for WB97X-D3/def2tzvp?

In principle it is not suitable, the two functionals employ different omega parameters, which notably affects exchange part of the functional and optimal scale factor.

You can fit scale factor yourself, see http://sobereva.com/391 (in Chinese, you can use Google translator)

Sir following your guide I get frequency scale factor of 0.9481 and ZPE scale factor 0.97541. Now  I put in Shermo settings sclZPE= 0.97541 but what values should I put in sclheat, sclS and sclCV?

#25 Re: Quantum Chemistry » Gibbs free energy of single atom in ORCA » 2021-02-07 06:08:21

Sir WB97XD/def2tzvp ZPE scale factor be used for WB97X-D3/def2tzvp?

#26 Re: Quantum Chemistry » Gibbs free energy of single atom in ORCA » 2021-02-07 06:04:44

Thanks sir, Shermo successfully computed G value for single atom. Sir can we set point group for molecule in Shermo? as sometimes if actual point group of molecule is Cs or higher but due to little variations in bonds of optimized geometry Orca and Shermo both find it C1.

#27 Quantum Chemistry » Gibbs free energy of single atom in ORCA » 2021-02-06 19:23:51

Abdullah
Replies: 12

I am calculating binding Gibbs free energy for Li doped C48, but in ORCA for single Li atom I get Final Gibbs free energy   ...   inf Eh.

#29 Re: Quantum Chemistry » AuxJK basis functions in ORCA » 2021-01-30 10:11:02

Thanks Professor, can we modify built-in list of Multiwfn ORCA input templates?

#30 Quantum Chemistry » AuxJK basis functions in ORCA » 2021-01-30 05:57:25

Abdullah
Replies: 4

Hi, I have created ORCA input from Multiwfn with these keywords:
! DLPNO-CCSD(T) normalPNO RIJK cc-pVTZ cc-pVTZ/JK cc-pVTZ/C tightSCF noautostart miniprint nopop

I get the following error for AuxJK basis functions not available. Is there any way to use RIJK approximations if auxiliary basis functions are not available for the atom?
There are no AuxJK  basis functions on atom number  10 (Li)

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