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#1 2025-11-13 04:24:40

Ainosya
Member
Registered: 2024-12-06
Posts: 10

Isosurface Visualization Not Working

Hello,

I am trying to visualize an isosurface of the electronic density using a MOLDEN file generated by CFOUR and converted using Molden2AIM
I have no issue visualizing it using option 3 of Multiwfn—‘Output and plot specific property in a line’—as shown in the following screenshot
Screenshot-from-2025-11-12-23-22-15.png

However, when I try to generate an isosurface (option 5 of Main function menu), it does not seem to work. Could this be because I only have ghost atoms?
Screenshot-from-2025-11-12-23-20-44.png

Thank you for your help

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#2 2025-11-13 05:22:18

sobereva
Tian Lu (Multiwfn developer)
From: Athens, Greece
Registered: 2017-09-11
Posts: 2,148
Website

Re: Isosurface Visualization Not Working

I cannot clearly answer this question without more information. Please show me any error if you encountered, and show me commands you inputted in Multiwfn since booting up Multiwfn.

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#3 2025-11-13 16:54:02

Ainosya
Member
Registered: 2024-12-06
Posts: 10

Re: Isosurface Visualization Not Working

Hello,

I don’t get an explicit error, but when I select option 5 from the main function menu, followed by options 1 and 1 again (5 → 1 → 1 → -1), a new menu opens, but no 3D plot of the electron density appears in the newly opened window, even though I modified the iso value.


Screenshot-from-2025-11-13-11-52-16.png

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#4 2025-11-14 15:17:00

sobereva
Tian Lu (Multiwfn developer)
From: Athens, Greece
Registered: 2017-09-11
Posts: 2,148
Website

Re: Isosurface Visualization Not Working

The current isovalue is negative, however, electron density cannot be negative. So, try to change isovalue to a positive value, e.g. 0.001. If the problem still exists, please check Section 6.5 of Multiwfn manual and verify if the wavefunction has been properly loaded into Multiwfn.

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