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When i get an NCI isosurface with vdw interactions, i sometimes get these yellow-brownish color in my nci. I am not sure if this indicates and attractive vdW interaction, or a repulsive interaction. Could you clarify this to me?
Here is the image:
I am sending a URL with the image because i am getting an error with the "Postimage" website.
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This depends on the employed color scale. Usually there should be evident attractive vdW interaction, but may be marginally more repulsive than common attractive vdW interaction.
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I understand sir. In my case, i just got the "func1.cub" and "func2.cub files off multiwfn and opened them on vmd, using "source rdgfill.vmd". So i am using this color scheme of the script.
Thank you for your answer!
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