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#1 Re: Multiwfn and wavefunction analysis » Reading in XTB Molden file with gold atoms » 2020-02-19 20:58:45

Works now, many thanks for the fix and of course for the whole wonderful package!

#2 Multiwfn and wavefunction analysis » Reading in XTB Molden file with gold atoms » 2020-02-19 09:52:26

mpjohans
Replies: 2

Hello there,

I have some problems reading in a Molden file created by Grimme's XTB code. If I use the Molden file as created directly by XTB, it assumes gold has 54 core electrons and gives the error:

Au(    1)      Core electrons: 54     EDF primitive GTFs:  0
Warning: Unable to find proper EDF information for this atom!

If I edit the Molden file so that the third column gives the correct number of active electrons (11 for Au, 6 for oxygen), MultiWFN still adds the 58 core electrons to Au, giving in total 122 core electrons...

I got MultiWFN to read in the Molden without complaints, by specifying a net charge of 65 to gold, and leaving the charge of oxygen as 8. A quick test indicates that the results produced by MultiWFN are reasonable using this procedure.

The question is: is MultiWFN actually reading in the data properly with this odd setting of charges in the Molden file?

I have copy pasted the entire modified Molden file to the end of this message. The test system is Au-H2O, with the following XYZ coordinates:

Au   -3.1613340   -0.2396687    4.1142669
O    -3.1238195   -1.0529979    6.5122043
H    -3.6543341   -0.7098369    7.2463837
H    -3.2163609   -2.0167627    6.5464291

The xtb command used to create the Molden file:
xtb coord --molden --chrg -0 --acc 0.1 --gfn 1

Using MultiWFN 3.7(dev) release date: 2020-Jan-30

Cheers,
    Mikael

[Molden Format]
[Title]
[Atoms] AU
AU     1    65 -0.59740554745799E+01 -0.45290820562473E+00  0.77748376785964E+01
O      2     8 -0.59031633435678E+01 -0.19898776495037E+01  0.12306282648400E+02
H      3     1 -0.69056906470651E+01 -0.13413973400165E+01  0.13693680646807E+02
H      4     1 -0.60780412455216E+01 -0.38111291780190E+01  0.12370958147353E+02
[GTO]
           1 0
 d           4   1.00000000000000
   4.11227012495660      -0.473324940844010
  0.806185037858737       0.444535854258023
  0.446191616580503       0.220093041100352
  0.255520804275981       1.799334157976449E-002
 s           6   1.00000000000000
   3.13574168248545       7.648787779934786E-003
   1.46954105694718       5.028748904572377E-002
  0.429170727024132      -0.285734603859830
  0.268962144785663      -6.041806113357730E-002
  0.161301092388156       0.241714969909251
  0.101964157764926       4.658609754208300E-002
 p           6   1.00000000000000
   2.05081467491250       9.734601823274501E-003
  0.427246249106250      -6.316501149654702E-002
  0.250019283150000      -5.711049520372285E-002
  0.140456333955000       5.738814902734826E-002
  9.068998265250000E-002  4.789881971164786E-002
  5.764302795562500E-002  4.394514711933854E-003

           2 0
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   152.287696607881      -0.128259784124054
   27.9280152159731      -0.178972249529991
   7.84837479238452      -0.172118558938750
   1.12233502027056       0.260053743770140
  0.509384658790786       0.241553208010412
  0.242922665325103       4.224420474647501E-002
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   7.09409912597673       0.848929183574319
   2.53833626053460       0.866990360869820
   1.06107307678439       0.621673076410288
  0.485194891641043       0.231598405185667
  0.229383025506425       2.380113334610014E-002

           3 0
 s           4   1.00000000000000
   7.61199720705997       0.185361036261688
   1.39290170588020       0.237716782231063
  0.386963346250483       0.186322055973239
  0.128429655926973       4.458969372625468E-002
 s           7   1.00000000000000
   10.2562860703149       -1.31865446782543
  0.622796532587539        1.60387770076958
  0.239100766785391       0.601323010177280
   7.61199720705997      -0.980904319863310
   1.39290170588020       -1.25796350353405
  0.386963346250483      -0.985989899905078
  0.128429655926973      -0.235962336419595

           4 0
 s           4   1.00000000000000
   7.61199720705997       0.185361036261688
   1.39290170588020       0.237716782231063
  0.386963346250483       0.186322055973239
  0.128429655926973       4.458969372625468E-002
 s           7   1.00000000000000
   10.2562860703149       -1.31865446782543
  0.622796532587539        1.60387770076958
  0.239100766785391       0.601323010177280
   7.61199720705997      -0.980904319863310
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  0.386963346250483      -0.985989899905078
  0.128429655926973      -0.235962336419595

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