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		<title><![CDATA[Multiwfn forum / Acceleration calculation]]></title>
		<link>http://sobereva.com/wfnbbs/viewtopic.php?id=842</link>
		<description><![CDATA[The most recent posts in Acceleration calculation.]]></description>
		<lastBuildDate>Mon, 26 Jun 2023 08:06:15 +0000</lastBuildDate>
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			<title><![CDATA[Re: Acceleration calculation]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=3228#p3228</link>
			<description><![CDATA[<p>Thanks a lot, Tian! <br />Have a nice day!</p><p>Gloria</p>]]></description>
			<author><![CDATA[dummy@example.com (gloria)]]></author>
			<pubDate>Mon, 26 Jun 2023 08:06:15 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=3228#p3228</guid>
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			<title><![CDATA[Re: Acceleration calculation]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=3227#p3227</link>
			<description><![CDATA[<p>MOLOPT is a fully generally contracted basis set, which is quite inefficient for wavefunction analysis purpose in Multiwfn.</p><p>I suggest using pob-DZVP-rev2 or 6-31G* instead, which are segment contracted basis sets, the cost in Multiwfn is significantly lower. If you have to use a GTH pseudopotential basis set, DZVP-GTH or TZVP-GTH can be considered, which are also cheaper in Multiwfn than DZVP-MOLOPT-SR-GTH.</p>]]></description>
			<author><![CDATA[dummy@example.com (sobereva)]]></author>
			<pubDate>Fri, 23 Jun 2023 14:00:56 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=3227#p3227</guid>
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			<title><![CDATA[Re: Acceleration calculation]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=3226#p3226</link>
			<description><![CDATA[<p>This is my input file. Thanks a lot&#160; for your advice and help!<br />___________________________________________________________</p><p>&amp;FORCE_EVAL<br />&#160; METHOD Quickstep<br />&#160; &amp;DFT<br />&#160; &#160; UKS<br />&#160; &#160; BASIS_SET_FILE_NAME ${data}/BASIS_SET<br />&#160; &#160; BASIS_SET_FILE_NAME ${data}/BASIS_MOLOPT<br />&#160; &#160; POTENTIAL_FILE_NAME ${data}/GTH_POTENTIALS<br />&#160; &#160; &#160; &#160;&amp;MGRID<br />&#160; &#160; &#160; CUTOFF 600<br />&#160; &#160; &#160; REL_CUTOFF 60<br />&#160; &#160; &#160; NGRIDS 4<br />&#160; &#160; &amp;END MGRID<br />&#160; &#160; &amp;QS<br />&#160; &#160; &#160; EPS_DEFAULT 1.0E-15<br />&#160; &#160; &#160; #&#160; &#160; &#160; EPS_PGF_ORB 1.0E-06<br />&#160; &#160; &amp;END QS<br />&#160; &#160; &amp;POISSON<br />&#160; &#160; &#160;PERIODIC XYZ<br />&#160; &#160; &amp;END POISSON<br />&#160; &#160; &amp;SCF<br />&#160; &#160; &#160;MAX_SCF 500<br />&#160; &#160; &#160;SCF_GUESS RESTART<br />&#160; &#160; &#160;EPS_SCF&#160; &#160;5.0E-6<br />&#160; &#160; &#160;CHOLESKY INVERSE<br />&#160; &#160; &#160;&amp;OT<br />&#160; &#160; &#160; &#160; PRECONDITIONER FULL_SINGLE_INVERSE<br />&#160; &#160; &#160; #&#160; ENERGY_GAP 0.001<br />&#160; &#160; &#160; &#160; MINIMIZER DIIS<br />&#160; &#160; &#160;&amp;END OT<br />&#160; &#160; &amp;PRINT<br />&#160; &#160; &#160; &#160;&amp;RESTART<br />&#160; &#160; &#160; &#160; &#160;&amp;EACH<br />&#160; &#160; &#160; &#160; &#160; &#160;MD 20<br />&#160; &#160; &#160; &#160; &#160;&amp;END EACH<br />&#160; &#160; &#160; &#160;&amp;END RESTART<br />&#160; &#160; &#160;&amp;END PRINT<br />&#160; &#160; &amp;END SCF<br />&#160; &#160; &amp;XC<br />&#160; &#160; &#160; &amp;XC_GRID<br />&#160; &#160; &#160; &#160; &#160;XC_DERIV&#160; SPLINE2<br />&#160; &#160; &#160; &#160; &#160;XC_SMOOTH_RHO NN50<br />&#160; &#160; &amp;END XC_GRID<br />&#160; &#160; &amp;XC_FUNCTIONAL PBE<br />&#160; &#160; &amp;END XC_FUNCTIONAL<br />&#160; &#160; &amp;VDW_POTENTIAL<br />&#160; &#160; &#160; &#160; &#160;POTENTIAL_TYPE&#160; &#160;NON_LOCAL<br />&#160; &#160; &#160; &#160; &#160;&amp;NON_LOCAL<br />&#160; &#160; &#160; &#160; &#160; &#160;CUTOFF 300.<br />&#160; &#160; &#160; &#160; &#160; &#160;KERNEL_FILE_NAME ${data}/rVV10_kernel_table.dat<br />&#160; &#160; &#160; &#160; &#160; &#160;TYPE RVV10<br />&#160; &#160; &#160; &#160; &#160;&amp;END NON_LOCAL<br />&#160; &#160; &amp;END VDW_POTENTIAL<br />&#160; &#160; &amp;END XC<br />&#160; &#160;&amp;PRINT<br />&#160; &#160; &#160;&amp;MO_MOLDEN #Exporting .molden file containing wavefunction information<br />&#160; &#160; &#160; &#160;NDIGITS 9 #Output orbital coefficients if absolute value is larger than 1E-9<br />&#160; &#160; &#160;&amp;END MO_MOLDEN</p><p>&#160; &#160;&amp;END PRINT<br />&#160; &amp;END DFT<br />&#160; &amp;PROPERTIES<br />&#160; &#160; &amp;TDDFPT <br />&#160; &#160; &#160; NSTATES&#160; &#160;500 <br />&#160; &#160; &#160; MIN_AMPLITUDE 0.01 <br />&#160; &#160; &#160; MAX_KV 100<br />&#160; &#160; &#160;&amp;END TDDFPT<br />&#160; &amp;END PROPERTIES</p><p>&#160; &amp;SUBSYS<br />&#160; &#160; &amp;KIND C<br />&#160; &#160; &#160; ELEMENT&#160; &#160;C<br />&#160; &#160; &#160; BASIS_SET DZVP-MOLOPT-SR-GTH-q4<br />&#160; &#160; &#160; POTENTIAL GTH-PBE<br />&#160; &#160; &amp;END KIND</p><p>&#160; &#160; &amp;KIND H<br />&#160; &#160; &#160; ELEMENT&#160; &#160;H<br />&#160; &#160; &#160; BASIS_SET DZVP-MOLOPT-SR-GTH-q1<br />&#160; &#160; &#160; POTENTIAL GTH-PBE<br />&#160; &#160; &amp;END KIND</p><p>&#160; &#160; &amp;KIND S<br />&#160; &#160; &#160; ELEMENT&#160; &#160;S<br />&#160; &#160; &#160; BASIS_SET DZVP-MOLOPT-SR-GTH-q6<br />&#160; &#160; &#160; POTENTIAL GTH-PBE<br />&#160; &#160; &amp;END KIND<br />&#160; &#160; &amp;CELL<br />&#160; &#160; &#160; A 34.76132 0.0 0.0<br />&#160; &#160; &#160; B -17.380659999999992 30.10418618908008 0.0<br />&#160; &#160; &#160; C 0.0 0.0 33.5796<br />&#160; &#160; &#160; MULTIPLE_UNIT_CELL&#160; 1 1 1<br />&#160; &#160; &#160; &#160;PERIODIC XYZ<br />&#160; &#160; &amp;END CELL<br />&#160; &#160; &amp;TOPOLOGY<br />&#160; &#160; &#160; &#160; COORD_FILE_NAME X.xyz<br />&#160; &#160; &#160; &#160; COORD_FILE_FORMAT xyz<br />&#160; &#160; &#160; &#160; MULTIPLE_UNIT_CELL&#160; 1 1 1<br />&#160; &#160; &amp;END TOPOLOGY<br />&#160; &amp;END SUBSYS<br />&amp;END FORCE_EVAL<br />&amp;MOTION<br />&#160; &amp;GEO_OPT<br />&#160; &#160; &#160; TYPE MINIMIZATION<br />&#160; &#160; &#160; MAX_DR&#160; &#160; 1.0E-03<br />&#160; &#160; &#160; MAX_FORCE 1.0E-03<br />&#160; &#160; &#160; RMS_DR&#160; &#160; 1.0E-03<br />&#160; &#160; &#160; RMS_FORCE 1.0E-03<br />&#160; &#160; &#160; MAX_ITER 500<br />&#160; &#160; &#160; OPTIMIZER BFGS<br />&#160; &#160; &#160; &amp;BFGS<br />#&#160; &#160; &#160; &#160; &#160; &#160; &#160; RESTART_FILE_NAME Cu2O_SM26-BFGS.Hessian<br />#&#160; &#160; &#160; &#160; &#160; &#160; &#160; RESTART_HESSIAN<br />&#160; &#160; &#160; &amp;END BFGS<br />&#160; &#160; &#160; #&#160; &#160; &#160; &amp;CG<br />&#160; &#160; &#160; #&#160; &#160; &#160; &#160; &#160;MAX_STEEP_STEPS&#160; 0<br />&#160; &#160; &#160; #&#160; &#160; &#160; &#160; &#160;RESTART_LIMIT 9.0E-01<br />&#160; &#160; &#160; #&#160; &#160; &#160; &amp;END CG<br />&#160; &#160;&amp;END GEO_OPT<br />&amp;END MOTION</p>]]></description>
			<author><![CDATA[dummy@example.com (gloria)]]></author>
			<pubDate>Fri, 23 Jun 2023 12:11:49 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=3226#p3226</guid>
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		<item>
			<title><![CDATA[Re: Acceleration calculation]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=3225#p3225</link>
			<description><![CDATA[<p>Dear Gloria,</p><p>DZVP-GTH or DZVP-MOLOPT-SR-GTH? They are quite different in calculation speed in Multiwfn.</p><p>It is best to paste your CP2K input file here (without coordinate part)</p><p>Best,</p><p>Tian</p>]]></description>
			<author><![CDATA[dummy@example.com (sobereva)]]></author>
			<pubDate>Thu, 22 Jun 2023 11:37:05 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=3225#p3225</guid>
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			<title><![CDATA[Re: Acceleration calculation]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=3224#p3224</link>
			<description><![CDATA[<p>Thanks a lot, sobereva! I&#039;m sure I use 24 threads just showing like yours. My system is a heterostructure combined two layers, which has more than 700 atoms. Now I used DZVP and PBE in CP2K to do some tests. High accuracy is needed for my further calculation(eg: HSE06, PBE0) At beginning, I used 0.5 of grid and it was so slow. Now I use 1 for grid and it become much faster. However, it still needs 20-30 mins. What can I do to further improve the speed?</p><p>Thanks in advance!</p><p>Best regards,<br />Gloria</p>]]></description>
			<author><![CDATA[dummy@example.com (gloria)]]></author>
			<pubDate>Thu, 22 Jun 2023 08:49:43 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=3224#p3224</guid>
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		<item>
			<title><![CDATA[Re: Acceleration calculation]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=3223#p3223</link>
			<description><![CDATA[<p>Dear Gloria,</p><p>Please make sure that Multiwfn indeed works in parallel mode with your specified number of threads. It can be seen when Multiwfn just boots up:</p><div class="codebox"><pre><code> ( Number of parallel threads:  24  Current date: 2023-06-22  Time: 00:09:26 )</code></pre></div><p>Another way is reducing quality of grid, or use IOp(9/40=3) instead of IOp(9/40=4) to reduce the number of configuration coefficients taken into account. I cannot give you more detailed advise without having more information about your system and computational level.</p><p>In addition, please always use latest version, parallel efficiency of grid data calculation has been notably improved in the recent update.</p><p>Best regards,</p><p>Tian</p>]]></description>
			<author><![CDATA[dummy@example.com (sobereva)]]></author>
			<pubDate>Wed, 21 Jun 2023 16:10:21 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=3223#p3223</guid>
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			<title><![CDATA[Acceleration calculation]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=3222#p3222</link>
			<description><![CDATA[<p>Hi all,</p><p>I want to use Multiwfn to analysis electron-hole transfer of excitation. I calculated 500 excited states. The analysis process is really slow. Could you tell me any methods to improve analysis speed?( I use no GUI version in supercomputer, I have tried to change nthreads to 24 in setting.ini. It doesn&#039;t seem to work.</p><p>Thanks in advance for your help.</p><p>All the regards,</p><p>Gloria</p>]]></description>
			<author><![CDATA[dummy@example.com (gloria)]]></author>
			<pubDate>Wed, 21 Jun 2023 15:24:14 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=3222#p3222</guid>
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