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		<title><![CDATA[Multiwfn forum / Parameters of the fitted plane in MD]]></title>
		<link>http://sobereva.com/wfnbbs/viewtopic.php?id=1524</link>
		<description><![CDATA[The most recent posts in Parameters of the fitted plane in MD.]]></description>
		<lastBuildDate>Wed, 04 Sep 2024 04:45:42 +0000</lastBuildDate>
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			<title><![CDATA[Re: Parameters of the fitted plane in MD]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=4583#p4583</link>
			<description><![CDATA[<p>Dear Dune,</p><p>If you need fitted plane parameters for each frame, you need to modify source code as follows:</p><p>Find the following code in otherfunc.f90 in source code package of Multiwfn</p><div class="codebox"><pre><code>			do iframe=1,maxval(frameidx)
				call readxyztrj(10)
                		if (all(frameidx/=iframe)) cycle
				call ptsfitplane(atmsel,nsel,pleA,pleB,pleC,pleD,rmsfit) !Fit plane
...</code></pre></div><p>Change it to</p><div class="codebox"><pre><code>			do iframe=1,maxval(frameidx)
				call readxyztrj(10)
                		if (all(frameidx/=iframe)) cycle
				call ptsfitplane(atmsel,nsel,pleA,pleB,pleC,pleD,rmsfit) !Fit plane
				write(*,&quot;(i8,&#039; Plane equation: A=&#039;,f10.5,&#039;  B=&#039;,f10.5,&#039;  C=&#039;,f10.5,&#039;  D=&#039;,f10.5)&quot;) iframe,pleA,pleB,pleC,pleD
...</code></pre></div><p>and then recompile Multiwfn.</p><p>Best regards,</p><p>Tian</p>]]></description>
			<author><![CDATA[dummy@example.com (sobereva)]]></author>
			<pubDate>Wed, 04 Sep 2024 04:45:42 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=4583#p4583</guid>
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			<title><![CDATA[Parameters of the fitted plane in MD]]></title>
			<link>http://sobereva.com/wfnbbs/viewtopic.php?pid=4581#p4581</link>
			<description><![CDATA[<p>Hi,</p><p>I am new to Multiwfn and I am using the 3.8 dev version to calculate planarity metrics (MPP and SDP) for molecular dynamics trajectories.</p><p>For single configurations, the output that appears to the screen gives the parameters of the fitted plane. <br />However, for a trajectory, no output is printed on the screen and thus we lose the information of the parameters of the fitted plane.</p><p>Is there a way to extract the parameters of the fitting plane for all frames in a trajectory while calculating MPP and SDP?</p><p>Thanks in advance for your help,</p><p>Dune</p>]]></description>
			<author><![CDATA[dummy@example.com (DuneA)]]></author>
			<pubDate>Tue, 03 Sep 2024 15:57:12 +0000</pubDate>
			<guid>http://sobereva.com/wfnbbs/viewtopic.php?pid=4581#p4581</guid>
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